Arginase Lab Report

A milk-based, litmus broth tube is incubated and observed after 48 hours. Observations include lactose fermentation without gas as well as with gas, the reduction of litmus, casein protein coagulation and casein and protein hydrolysis. These characteristics were all determined based on the color of the solution and the production of a curd, the curds density and the production of a gas. To determine the density of the curd, the tube was slightly turned to see rather or not it was mobile or concentrated towards the bottom.

The purpose of this experiment is to create a complete genomic library of Aliivibrio fisheri through the use of the lux operon. The examination of the lux operon gene occurs through the extraction of the DNA of Aliivibrio fischeri and digest a large piece of DNA to smaller random pieces. The fragment of DNA will later be ligated together in plasmid. Plasmid acts as vectors to transport DNA from one organism to another. The DNA will then run through a UV-visible spectrophotometer to test the absorbance of the extracted DNA. Both DNA and RNA has a maximum absorbance of 260 nm. The absorbance of 260/280 should be in between 1.8 and 1.9 to represent a pure sample of DNA. If the reading is higher than 1.9 then there is RNA contamination and if the reading is less than 1.8 there is protein contamination.

The purpose of this lab is to determine the relationship that exists between the number of amylase gene copies and ancestral diet. As the human civilization moved forward toward agriculture the diets of humans also changed. Depending on where the humans originated would give insight to how much of their diet was starch based. My family’s geographic origins are from China. Thus knowing that the country has a high starch based diet, we would suggest that I would have a high amylase production.

Four test tubes were filled with 1% bacterial amylase and 30mL of .05M phosphate buffer solution. Then four test tubes were filled with 3% fungal amylase and 30mL of .05M phosphate buffer solution. The bacterial and fungal procedures were performed at different times. The bacterial amylase was tested first. The test tubes were then placed in baths of either 0, 25, 55, or 85 °C. They were allowed 5 minutes to acclimate. Then the results at 0 minutes were measured by using a pipette and placing 3 drops of the solution in a spot plate, along with 3 drops of iodine. Then the tube with just starch was mixed with the amylase. This was repeated at all the temperatures. Then the results were obtained using the same methods for the next ten minutes at intervals of two minutes. The whole process was then repeated again with the fungal amylase. Then the results were obtained by observing the spot plates that had the hydrolyzed starch and iodine. Using a color chart with a scale from 1-5 the data was translated into quantitative data, with a 1 meaning that the starch was completely hydrolyzed and a 5 meaning that no hydrolization had

To catalyze a reaction, an enzyme will grab on (bind) to one or more reactant molecules. In this experiment we examined how increasing the volume of the extract added to the reaction would affect the rate of the reaction. The enzyme used was horseradish peroxidase which helps catalyze hydrogen peroxide. Using different pH levels, the absorbance rate of the reaction was measured to see at which condition the enzyme worked best. The rates of absorption were calculated using a spectrophotometer in 20 second intervals up to 120 seconds. It was hypothesized that the optimal pH for the enzyme was pH 7 while the 1.0 ml peroxidase would have the best reaction rate. At the end of the experiment the results prove the hypothesis to be incorrect.

Enzymes are proteins used in nearly all chemical reactions in organisms. These proteins are known as catalyst to speed up or enhance reactions. Enzymes are reliant on substrates; they are known to convert nearly one thousand substrate molecules per second during reactions (Freeman, 2017, 90). In reactions, there are other active conditions that can affect the enzyme. These include, but are not limited to different pH levels, changes in temperature, amount of inhibitor, and amount of salt.

The purpose of quantitative analysis of protein using a spectrophotometer is to measure the concentration of proteins in a given sample. The experiment is conducted by laboratory method (Biuret Test) and using spectrophotometer to analyze the absorbance of reactants at 540 nm, hence determining the concentration of the proteins in a given sample.

In an organism 's body, chemical reactions are constantly taking place. These essential reactions can make or break the well-being of the body, yet the brain behind these changes is often times not recognized. This little brain or “macromolecule” is called an enzyme. An enzyme is a type protein that is able to speed up over 5,000 different reaction types an organism (2). Through catalyzation, the process of speeding up chemical reactions, enzymes attach to a substrate/molecule and break it down so that it can be used throughout the organism. Enzymes break down substrates in a very efficient way; through an assembly line (3). One enzyme starts off by attaching itself to a substrate at the active site, where the two undergo chemical reactions.

Enzymes are biological catalysts that increase the rate of a reaction without being chemically changed. Enzymes are globular proteins that contain an active site. A specific substrate binds to the active site of the enzyme chemically and structurally (4). Enzymes also increase the rate of a reaction by decreasing the activation energy for that reaction which is the minimum energy required for the reaction to take place (3). Multiple factors affect the activity of an enzyme (1). These factors include the pH and the temperature of the solution (1). Most enzymes have a preferred temperature and pH range (2). The preferred temperature for catalase falls between the ranges of thirty five to fifty degrees Celsius (4). Temperatures that are too high denature the enzyme and halt the enzyme’s activity (2). Catalase denatures starts to denature at fifty five degrees Celsius (2). Reactions in the human body produce hydrogen peroxide as a product (1). Since hydrogen peroxide is poisonous to the human body, catalase catalyzes hydrogen peroxide into water and oxygen (2 H2O2 → 2 H2O + O2) (1). According to the collision theory, a reaction can only occur if particles collide with sufficient energy to overcome the activation energy and with correct geometrical orientation (3). Increasing temperature increases the kinetic energy of the particles which means that an increase in temperature will increase the speed of the hydrogen peroxide and the catalase molecules which

Substances that bind or react to each other use a certain amounts of energy to create a new product in a chemical reaction. Enzymes are proteins used in these reactions to create the same product using less of its supplied energy in that same amount of time. Enzymes are biocatalysts and will bind with the reactive molecules to create substrates forming enzyme-substrate complexes. These complex alter the chemical bonding in the molecules so that they react to each other in the same amount of time using less activation energy.

Often people use hydrogen peroxide to clean wounds instead of alcohol. The reason for this is that, it does not have a burning sensation after applying it, while alcohol on the other hand has a burning sensation. After the supplication of this chemical, the skin absorbs this chemical, it disrupts the homeostasis of the body. Hydrogen peroxide is often used for small cuts or an affected area. Once applied to the affected area, this chemical releases oxygen, which creates foaming that helps both the removal of dead skin as well as helps clean the affected area. Using this chemical as a replacement of alcohol is not sensible to do, as there are many issues that come along with this. Hydrogen Peroxide contains a large amount of oxygen, and if

Metabolic pathways are a sequences of steps found in biochemical reactions in which the product of one reaction is the substrate for the next reaction [3]. Metabolic pathways most likely happen in specific locations in the cell. The control of any metabolic process depends on control of the enzymes responsible for the reactions occur in the pathways. After food is added to the body, molecules in the digestive system called enzymes break proteins down into fats into fatty acids, amino acids, and carbohydrates into simple sugars (for example, glucose). Enzymes plays an important role in the different metabolic pathways [5]. Enzyme is a protein that made up of carbon, oxygen, hydrogen and nitrogen serving as a

ABSTRACT: The purpose of the experiments for week 5 and week 6 support each other in the further understanding of enzyme reactions. During week 5, the effects of a substrate and enzyme concentration on enzyme reaction rate was observed. Week 6, the effects of temperature and inhibitor on a reaction rate were monitored. For testing the effects of concentrations, we needed to use the table that was used in week 3, Cells. The 3 concentrations of enzymes were 0.5 ml, 1.0 ml, and 2.0 ml of turnip extract, while the substrate consisted of 0.1ml, 0.2 ml, and 0.4 ml of hydrogen peroxide. In a separate tube, the control was made up of turnip extract and guaiacol, known as the color reagent. This was recorded the absorbance every 20 seconds for 3 minutes.

Bio Chem lab Report 04 Enzyme Biochemistry Group Member: Chan Man Jeun Duncan (16002621) Law Sze Man (16000478) Introduction Enzyme is a protein base structure substance in our body. It works at a biocatalyst that will catalyzing the chemical reaction, which helps to speed up the chemical reaction. Enzyme could only function in specific shape, and the shape of enzyme is depending on the environment, therefore it is hard for an enzyme to function well in an extreme environment. The aim of this experiment is to see can the enzyme functions normally in different environment(pH, temperature and salt concentration) via using starch solution, amylase from saliva, 0.5M HCl solution, 0.5M NaOH solution and NaCl solution, and using iodine solution

After a gram stain was done unknown #257 was identified as a gram positive organism because when observed under the microscope the organism appeared purple with cocci in clusters. The organism was also catalase positive which means that it produced enzyme catalase and bubbled when hydrogen peroxide was added to it.