Introduction and Experimental Objectives
The aim of this experiment was to understand the function and formation of biofilms in bacteria and explore their role while infection occurs in the host. Biofilms have become more prevalent in hospitals and adhere to instruments used in medical procedures and even dry objects in hospitals, for example hospital curtains. The bacteria that form these biofilms can be dangerous to humans, for example Staphylococcus aureus, a methicillin-resistant bacteria. [1]
Biofilms are a group of microbial cells that are surrounded by a polymeric matrix including proteoglycans, peptidoglycans and polysaccharides located outside the cell that can allow the growth of the pathogens to slow down, allow them to attach to surfaces, defend them from the immune system and enable the nutrition of the pathogen.
In this experiment, to stain the biofilm, Crystal Violet was used as biofilms contain peptidoglycans in their matrix. Peptidoglycans pick up crystal violet stain strongly and so when a strong biofilm is formed, crystal violet will stain darkly due to the many peptidoglycans present in the cell. On the
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As the strains used are the same as in the first test. A bio-film forming strain was identified in strain one and two from the initial experiment, and no biofilm forming strains were found in the third strain. This was reflected in this experiment. The first strain formed a black streak on the agar, representing the presence of a biofilm, which was expected from the previous experiment. Another expected result was the presence of the red streak in the red agar for the third strain suggesting no biofilm was present. The second strain formed a dark red streak, however, which was unexpected as a dark streak indicating a biofilm was expected from the initial experiment. However, the dark red streak indicated some biofilm was present, although not as much as in the first
Identification of bacteria within Unknown Culture #21 In this experiment, an unknown culture of two different types of bacteria was assigned to each person, a number of tests were performed to isolate and identify these bacterial cells. Based on knowledge from the previous experiments completed in lab, a basic understanding of each type of bacteria was used to create a flow chart that would aid the process of identifying the unknown bacteria within the culture. A gram stain that is performed initially will narrow down the types of tests certain bacteria will and will not respond to. In addition to the gram stain, some of the tests that were used include, a catalase test, an Eosin methylene blue (EMB) agar test, a bile esculin test, and a 6.5% sodium chloride (NaCl) test.
Mannitol Salt Agar (MSA) plate, MacConkey agar (MC) plate, Eosin Methylene Blue agar (EMB), and Hektoen Enteric Agar (HEA) (3). The MacConkey agar plate and the Mannitol Salt agar plate are both used in the identification of the unknown. The MC plate is a selective and differential medium. It is considered a selective medium because the bile salts and crystal violet aspect of the medium prevent the growth of gram positive bacteria (3). This medium is differential because of the lactose and neutral red.
In this experiment, we cultivated an unknown specimen containing two microorganisms. The purpose of this experiment was to use a variety of biochemical test previously learned in the lab to identify the unknown bacteria. The identification of unknown bacteria is a major part of microbiology. Microbiologist observe samples such as blood and sputum in the laboratory for the presence of microorganisms. Identifying unknown bacteria is extremely important in clinical settings because it helps physicians find treatment for infections.
A starch agar plate was inoculated with a streak of the unknown bacteria and then incubated. On the second day of incubation, the plate was removed from the incubator and placed over a hot plate heating Iodine solids. The smoke of the Iodine stained the plate to display the presence or absence of a halo around the bacteria 2.12 Lipid Hydrolysis This test was done by making a single line streak inoculation on a tributyrin agar plate and allowing incubation. After the incubation period, the plate was observed for the presence or absence of a halo around the bacteria.
Staphylococcus epidermidis is the organism that was identified based on the tests that I had conducted. The tests that I used to identify this organism were the coagulase test and the catalase test. My bacterium was beta hemolytic as well. First, a gram stain had to be done to determine whether the organism was a gram positive organism or a gram negative organism. This determined which set of tests that had to be done.
In the laboratory, identification of an unknown bacterium is often necessary. In the lab, a random sample consisting of three different bacteria was selected. The sample contained one gram-positive, one gram-negative paracolon, and one gram-negative coliform. The purpose of the experiment is to identify each of the three species that the mixture contained. After receiving an unknown mixture, the sample was streaked for isolation onto TSA, blood agar, and MacConkey plates.
The unknown bacteria was then tested on multiple selective and differential media. Growth was present on the MacConkey Agar and the colonies were the same color as the plate, which told me my bacteria was gram negative and did not ferment lactose. There was no growth on the Mannitol Salt Agar, and this told me the unknown was not salt tolerant and did not
Staphylococcus Aureus belongs to the extremely common bacteria of microflora of the skin and mucous membranes of the humans. These pathogens cause many infections, including superficial and deep purulent infections, poisoning, urinary tract infection etc. In the US, staphylococcus bacteria are supposed to be the leading cause of sepsis, postoperative wound and prosthesis infections. In addition, staphylococcus belongs to one of the leading causes of bacterial food poisoning. Staphylococcus Aureus is one of the most dangerous human pathogen.
Photograph Description: Photograph 1, shown on the previous page, was taken after 20 drops of the crystal violet dye was added to the solution, and photograph 2 was taken after 40 drops were added. As seen in the pictures, only a faint ring of violet was visible around the coacervates. Photographs 3-5 were taken after adding a drop of 20% concentration crystal violet dye onto the side of a slide. Discussion
Exercise 14: Unknown Identification Lab Report The purpose of the study was to identify the unknown bacterium using various biochemical tests in addition to using scientific methods in determining the outcome of the hypothesis. Each biochemical test will help determine the bacteria based on specific characteristics of each organism. I was giving unknown number 232. The first procedure that needed to be done after obtaining unknown bacterial mixture was to isolate the two bacteria in a pure culture using the streak plate method described in Microbiology Laboratory Manual Eight Edition. The material used was trypticase soy agar (TSA) plate, nutrient plate, starch agar, hydrogen peroxide, iodine reagent and microscope.
After a gram stain was done unknown #257 was identified as a gram positive organism because when observed under the microscope the organism appeared purple with cocci in clusters. The organism was also catalase positive which means that it produced enzyme catalase and bubbled when hydrogen peroxide was added to it. Three test were conducted based on the result of the gram staining procedure. Blood agar with a Novobiocin disk was chosen as well as DNase (DNA) and Mannitol Salts (MSA) agar. The Blood agar is a bright red, opaque plate and the streaking or the inoculation technique was a modified streaking for isolation with a heavy quadrant one.
Aseptic technique was initiated at the beginning of this experiment by cleaning the work surface with disinfected wipes. Personal protectives equipment was also worn. The material utilized in this experiment was: S. epidermidis culture broth, sterile cotton swab, streak plate, forceps in 70% alcohol, a lit tea light, and the three antibiotic disks (novobiocin, gentamicin, penicillin). The first step, I divided a plate into three quadrants and labelled them with the different antibiotic names. Using the lit tea light, like a bursen burner, I flamed the mouth of the S. epidermidis culture.
After experiment on microscope under oil immersion, I learned that my Unknown is gram positive. Under the lens, the bacteria appears in purple color. Its morphology is cocci arranged in cluster. However, during decolorizing process, I put too much alcohol to the crystal violet-iodine complex making the color overly removed. That led to the result of my gram positive has slightly redish
Prokaryotic organisms normally have a cytoplasmic membrane, cell wall, and sometimes a capsule. Bacterial cells are most commonly either coccus or bacillus in shape. The cell wall is either Gram positive or Gram negative. When the cell is Gram negative, the cell has an extra layer of lipopolysaccharides. The Gram positive has a thick layer of peptidoglycan.